Index

A

addForce() (OpenSMOG.SBM method)

C

createReporters() (OpenSMOG.SBM method)

createSimulation() (OpenSMOG.SBM method)

H

help() (OpenSMOG.SBM method)

L

loadCheckpoint() (OpenSMOG.SBM method) loadGro() (OpenSMOG.SBM method) loadState() (OpenSMOG.SBM method)

loadSystem() (OpenSMOG.SBM method) loadTop() (OpenSMOG.SBM method) loadXml() (OpenSMOG.SBM method)

M

minimize() (OpenSMOG.SBM method)

module OpenSMOG

O

OpenSMOG module

opensmogcheck() (OpenSMOG.SBM method)

P

pt (OpenSMOG.SBM attribute)

R

run() (OpenSMOG.SBM method)

runAA() (OpenSMOG.SBM method) runForClockTime() (OpenSMOG.SBM method)

S

saveCheckpoint() (OpenSMOG.SBM method) saveFolder() (OpenSMOG.SBM method)

saveState() (OpenSMOG.SBM method) SBM (class in OpenSMOG) setup_openmm() (OpenSMOG.SBM method)

V

version (OpenSMOG.SBM attribute)